TAP SET in Capsella rubella

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SET
PHD
zf-C2H2
TCR
Myb_DNA-binding
CXC

(Domain names are clickable)



List of proteins (39)

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namename additionClick button to show/hide sequence: Download sequence?
Carubv10000009mpacid=20914273 transcript=Carubv10000009m locus=Carubv10000009m.g ID=Carubv10000009m.v1.0 annot-version=v1.0
Carubv10000831mpacid=20908810 transcript=Carubv10000831m locus=Carubv10000831m.g ID=Carubv10000831m.v1.0 annot-version=v1.0
Carubv10002957mpacid=20908199 transcript=Carubv10002957m locus=Carubv10002957m.g ID=Carubv10002957m.v1.0 annot-version=v1.0
Carubv10003306mpacid=20910309 transcript=Carubv10003306m locus=Carubv10003306m.g ID=Carubv10003306m.v1.0 annot-version=v1.0
Carubv10003657mpacid=20910175 transcript=Carubv10003657m locus=Carubv10003657m.g ID=Carubv10003657m.v1.0 annot-version=v1.0
Carubv10003964mpacid=20896487 transcript=Carubv10003964m locus=Carubv10003964m.g ID=Carubv10003964m.v1.0 annot-version=v1.0
Carubv10004340mpacid=20896740 transcript=Carubv10004340m locus=Carubv10004340m.g ID=Carubv10004340m.v1.0 annot-version=v1.0
Carubv10004599mpacid=20896569 transcript=Carubv10004599m locus=Carubv10004599m.g ID=Carubv10004599m.v1.0 annot-version=v1.0
Carubv10004703mpacid=20896347 transcript=Carubv10004703m locus=Carubv10004703m.g ID=Carubv10004703m.v1.0 annot-version=v1.0
Carubv10008336mpacid=20893223 transcript=Carubv10008336m locus=Carubv10008336m.g ID=Carubv10008336m.v1.0 annot-version=v1.0
Carubv10008474mpacid=20892749 transcript=Carubv10008474m locus=Carubv10008474m.g ID=Carubv10008474m.v1.0 annot-version=v1.0
Carubv10008771mpacid=20890122 transcript=Carubv10008771m locus=Carubv10008771m.g ID=Carubv10008771m.v1.0 annot-version=v1.0
Carubv10008819mpacid=20889498 transcript=Carubv10008819m locus=Carubv10008819m.g ID=Carubv10008819m.v1.0 annot-version=v1.0
Carubv10011125mpacid=20892430 transcript=Carubv10011125m locus=Carubv10011125m.g ID=Carubv10011125m.v1.0 annot-version=v1.0
Carubv10011407mpacid=20891626 transcript=Carubv10011407m locus=Carubv10011407m.g ID=Carubv10011407m.v1.0 annot-version=v1.0
Carubv10011502mpacid=20892999 transcript=Carubv10011502m locus=Carubv10011502m.g ID=Carubv10011502m.v1.0 annot-version=v1.0
Carubv10011796mpacid=20892002 transcript=Carubv10011796m locus=Carubv10011796m.g ID=Carubv10011796m.v1.0 annot-version=v1.0
Carubv10013400mpacid=20897981 transcript=Carubv10013400m locus=Carubv10013400m.g ID=Carubv10013400m.v1.0 annot-version=v1.0
Carubv10013517mpacid=20900186 transcript=Carubv10013517m locus=Carubv10013517m.g ID=Carubv10013517m.v1.0 annot-version=v1.0
Carubv10013524mpacid=20898369 transcript=Carubv10013524m locus=Carubv10013524m.g ID=Carubv10013524m.v1.0 annot-version=v1.0
Carubv10013566mpacid=20900760 transcript=Carubv10013566m locus=Carubv10013566m.g ID=Carubv10013566m.v1.0 annot-version=v1.0
Carubv10013607mpacid=20899814 transcript=Carubv10013607m locus=Carubv10013607m.g ID=Carubv10013607m.v1.0 annot-version=v1.0
Carubv10013897mpacid=20900639 transcript=Carubv10013897m locus=Carubv10013897m.g ID=Carubv10013897m.v1.0 annot-version=v1.0
Carubv10015745mpacid=20897353 transcript=Carubv10015745m locus=Carubv10015745m.g ID=Carubv10015745m.v1.0 annot-version=v1.0
Carubv10017003mpacid=20888529 transcript=Carubv10017003m locus=Carubv10017003m.g ID=Carubv10017003m.v1.0 annot-version=v1.0
Carubv10017091mpacid=20887748 transcript=Carubv10017091m locus=Carubv10017091m.g ID=Carubv10017091m.v1.0 annot-version=v1.0
Carubv10018948mpacid=20886208 transcript=Carubv10018948m locus=Carubv10018948m.g ID=Carubv10018948m.v1.0 annot-version=v1.0
Carubv10019650mpacid=20906253 transcript=Carubv10019650m locus=Carubv10019650m.g ID=Carubv10019650m.v1.0 annot-version=v1.0
Carubv10020199mpacid=20906203 transcript=Carubv10020199m locus=Carubv10020199m.g ID=Carubv10020199m.v1.0 annot-version=v1.0
Carubv10021489mpacid=20906814 transcript=Carubv10021489m locus=Carubv10021489m.g ID=Carubv10021489m.v1.0 annot-version=v1.0
Carubv10022510mpacid=20903768 transcript=Carubv10022510m locus=Carubv10022510m.g ID=Carubv10022510m.v1.0 annot-version=v1.0
Carubv10022547mpacid=20901433 transcript=Carubv10022547m locus=Carubv10022547m.g ID=Carubv10022547m.v1.0 annot-version=v1.0
Carubv10022678mpacid=20902945 transcript=Carubv10022678m locus=Carubv10022678m.g ID=Carubv10022678m.v1.0 annot-version=v1.0
Carubv10022753mpacid=20903978 transcript=Carubv10022753m locus=Carubv10022753m.g ID=Carubv10022753m.v1.0 annot-version=v1.0
Carubv10022789mpacid=20902310 transcript=Carubv10022789m locus=Carubv10022789m.g ID=Carubv10022789m.v1.0 annot-version=v1.0
Carubv10023499mpacid=20901917 transcript=Carubv10023499m locus=Carubv10023499m.g ID=Carubv10023499m.v1.0 annot-version=v1.0
Carubv10027667mpacid=20911783 transcript=Carubv10027667m locus=Carubv10027667m.g ID=Carubv10027667m.v1.0 annot-version=v1.0
Carubv10027823mpacid=20914006 transcript=Carubv10027823m locus=Carubv10027823m.g ID=Carubv10027823m.v1.0 annot-version=v1.0
Carubv10027889mpacid=20914214 transcript=Carubv10027889m locus=Carubv10027889m.g ID=Carubv10027889m.v1.0 annot-version=v1.0
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum